16Respiration

📚
CHEMICAL EQUATION OF RESPIRATION
Equations:
  1. \(C_6H_{12}O_6 + 6O_2 \rightarrow 6CO_2 + 6H_2O + 36/38\ ATP\)
  2. \(C_6H_{12}O_6 + 6O_2 + 10H_2O \rightarrow 6CO_2 + 16H_2O + 36/38\ ATP\)
Water Balance:

Table 1: Water use and production

Point
Number
\(H_2O\) used
10 molecules
In glycolysis
2 molecules
In Krebs cycle
8 molecules
\(H_2O\) produced
16 molecules
Energy:

Table 1: Energy yield

Point
Value
Energy from glucose
686 kcal / earlier 673 kcal
Energy from 1 ATP
8.15 kcal
Earlier value of 1 ATP
7.3 kcal
Efficiency
\(\eta = \frac{38 \times 8.15}{686} \times 100 = 45.14\%\)
Nature: Respiration = oxidative process
MCQ Point:
Q1.
Amount of energy given by 1 ATP molecule is
📚
TYPES OF RESPIRATION
Based on Substrate:

Table 1: Respiration by substrate

Type
Substrate used
Floating / superficial respiration
Carbohydrate
Protoplasmic respiration
Lipid / fat / protein
Based on Reactant:

Table 1: Aerobic vs anaerobic respiration

Feature
Aerobic respiration
Anaerobic respiration
Oxygen
Used
Not used
Water
Evolved; oxygen of water from atmospheric oxygen
Not evolved because oxygen not taken
Oxidation
Complete oxidation of substrate
Incomplete oxidation of substrate
Energy
More; 36/38 ATP
Less; 2 ATP
ATP Ratio: Anaerobic : Aerobic ATP = \(\frac{1}{18}\) or \(\frac{1}{19}\)
📚
MECHANISM OF RESPIRATION
Overview:

Table 1: Respiration overview

Parameter
Number
Total steps
30
Total phases
4
Total sites
4
Rule
Each phase occurs at different site
Phases:
  1. Glycolysis / EMP pathway
  2. Oxidative decarboxylation / link reaction
  3. TCA cycle / Krebs cycle / citric acid cycle
  4. Oxidative phosphorylation / ETS / terminal oxidation
Image 1
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GLYCOLYSIS / EMP PATHWAY
Site: Cytoplasm
Shortcut: \(Glucose\ (C_6H_{12}O_6) \rightarrow 2\ Pyruvic\ acid\ (2CH_3COCOOH)\)
Net Reaction: \(Glucose + 2ADP + 2NAD^+ + 2H_3PO_4 \rightarrow 2Pyruvic\ acid + 2ATP + 2NADH_2 + 2H_2O\)
Steps:
Image 1

Table 1: Glycolysis steps

Step
Reaction / Product
Enzyme / Note
1
Glucose → Glucose-6-phosphate
Glucokinase / hexokinase; phosphorylation; ATP used; \(Mg^{2+}\)
2
Glucose-6-phosphate → Fructose-6-phosphate
Phosphohexoisomerase
3
Fructose-6-phosphate → Fructose-1,6-bisphosphate
Phosphofructokinase; phosphorylation; ATP used; rate-limiting step
4
Fructose-1,6-bisphosphate → 3-PGAl + DHAP
Aldolase; irreversible splitting
5
DHAP ⇌ 3-PGAl
Non-enzymatic / isomerisation step
6
3-PGAl → 1,3-diPGAl / 1,3-BPG
Dehydrogenase; oxidative step; \(NADH_2\) formed
7
1,3-diPGA → 3-PGA
Phosphoglycerate kinase; ATP formed
8
3-PGA → 2-PGA
Phosphoglyceromutase
9
2-PGA → PEP
Enolase; \(H_2O\) released
10
PEP → Pyruvic acid
Pyruvate kinase; ATP formed; \(Mg^{2+}\)
Step Classification:

Table 1: Glycolysis step types

Type
Step(s)
Note
Phosphorylation
1, 3
2 ATP consumed
Irreversible
1, 3, 10
regulatory checkpoints
Non-enzymatic
5
Isomerisation
Oxidative
6
2 \(NADH_2\) produced
Dephosphorylation / ATP generation
7, 10
4 ATP produced
Rate-limiting
3
Enzyme: phosphofructokinase
Total steps = 10; total enzymes = 9
Molecules Consumed:

Table 1: Glycolysis consumption

Molecule
Number
\(O_2\)
0
ATP
2
\(H_2O\)
Used in pathway as given in full equation
If oxygen is used, it enters Pasteur effect.
Gross Molecules Produced:

Table 1: Glycolysis gross production

Molecule
Number
\(CO_2\)
0
\(H_2O\)
2
ATP
4
\(NADH_2\)
2
\(FADH_2\)
0
Net Gain:

Table 1: Glycolysis net gain

Molecule
Number
\(CO_2\)
0
ATP
2
\(NADH_2\)
2
\(FADH_2\)
0
Special Points:
  • Isomerism + phosphorylation → steps 1, 2, 3
  • Splitting → step 4
  • ATP generation → steps 7, 10
  • Glucose-6-phosphate = Robinson’s ester
  • \(NADH_2\) = universal hydrogen acceptor
  • Plants can convert fatty acid to sugars via glyoxylate cycle; animals cannot
📚
HEXOSE MONOPHOSPHATE SHUNT / PENTOSE PHOSPHATE PATHWAY
Definition: Alternative pathway of glycolysis
Use: Glucose utilization when glycolysis is inhibited
Main Change: Direct oxidation of glucose-6-phosphate → 6-phosphogluconic acid → ribulose-5-phosphate
Common Enzyme with Glycolysis: Hexokinase
Energy:

Table 1: HMP shunt energy

Point
Value
\(NADH_2\) produced
12
ATP equivalent
36 ATP
ATP used
1
Net gain
35 ATP
Site: Cytoplasm + chloroplast; not mitochondria
Special Point: Resistant to cyanide
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OXIDATIVE DECARBOXYLATION / LINK REACTION
Image 1
Image 1
Site: Outer mitochondrial membrane
Reaction: \(2CH_3COCOOH + 2CoA + 2NAD^+ \rightarrow 2CH_3CO-CoA + 2CO_2 + 2NADH_2\)
Flow: Pyruvic acid → acetaldehyde → acetyl coenzyme A
Steps:

Table 1: Link reaction steps

Step
Process
Result
11
Decarboxylation
\(2CO_2\) removed
12
Oxidation + CoA addition
\(2NADH_2\) + 2 acetyl-CoA formed
Molecules Consumed:

Table 1: Link reaction consumption

Molecule
Number
\(O_2\)
0
\(H_2O\)
0
Molecules Produced / Net Gain:

Table 1: Link reaction products

Molecule
Number
\(CO_2\)
2
\(NADH_2\)
2
ATP equivalent from \(NADH_2\)
\(2 \times 3 = 6\ ATP\)
📚
TRICARBOXYLIC ACID CYCLE / KREBS CYCLE / CITRIC ACID CYCLE
Site: Matrix of mitochondria
Exception: Succinic dehydrogenase / succinate dehydrogenase found in inner mitochondrial membrane
Nature: Amphibolic pathway
Entry Reaction: \(Acetyl\ CoA + Oxaloacetic\ acid + H_2O \rightarrow Citric\ acid + CoA\)
Cycle Steps:
Image 1

Table 1: Krebs cycle steps

Step
Reaction / Product
Enzyme / Note
1 / 13
Acetyl-CoA + OAA → Citric acid
Citrate synthetase; \(H_2O\) used; CoA released
2 / 14
Citric acid → Cis-aconitic acid
Aconitase; \(H_2O\) released
3 / 15
Cis-aconitic acid → Isocitric acid
Aconitase; \(H_2O\) used
4 / 16
Isocitric acid → Oxalosuccinic acid
Isocitrate dehydrogenase; \(NADH_2\) formed
5 / 17
Oxalosuccinic acid → \(\alpha\)-ketoglutaric acid
Decarboxylation; \(CO_2\) released
6 / 18
\(\alpha\)-ketoglutaric acid → Succinyl-CoA
\(\alpha\)-ketoglutarate dehydrogenase complex; \(CO_2\) + \(NADH_2\) formed
7 / 19
Succinyl-CoA → Succinic acid
Succinate thiokinase; ATP formed through GTP; \(H_2O\) used
8 / 20
Succinic acid → Fumaric acid
Succinate dehydrogenase; \(FADH_2\) formed; limiting step
9 / 21
Fumaric acid → Malic acid
Fumarase; \(H_2O\) used
10 / 22
Malic acid → Oxaloacetic acid
Malate dehydrogenase; \(NADH_2\) formed
Important Compounds:

Table 1: Important Krebs compounds

Compound
Point
Citric acid
Most stable compound
\(\alpha\)-ketoglutaric acid
Most unstable + most important compound
Oxaloacetic acid / OAA
Regenerated at end of cycle
Step Classification:

Table 1: Krebs cycle step types

Type
Step(s)
Result
Hydration / \(H_2O\) consumed
1, 3, 7, 9
Total 4 steps
Dehydration / \(H_2O\) produced
2
Total 1 step
Oxidative steps
4, 6, 8, 10
Total 4 steps
\(NADH_2\) production
4, 6, 10
3 per cycle
\(FADH_2\) production
8
1 per cycle
ATP production
7
ATP through GTP
Decarboxylation
5, 6
\(CO_2\) produced
Molecules Consumed per Glucose:

Table 1: Krebs cycle consumption

Molecule
Number
\(O_2\)
0
\(H_2O\)
8
Gross Molecules Produced per Glucose:

Table 1: Krebs cycle gross production

Molecule
Number
\(CO_2\)
4
\(H_2O\)
2
ATP
2 through GTP
\(NADH_2\)
6
\(FADH_2\)
2
Net Gain per Glucose:

Table 1: Krebs cycle net gain

Molecule
Number
\(CO_2\)
4
\(H_2O\)
-6 consumed
ATP
2
\(NADH_2\)
6
\(FADH_2\)
2
📚
OXIDATIVE PHOSPHORYLATION / ETS / TERMINAL OXIDATION
Site: Inner mitochondrial membrane on \(F_1\) particle / oxysome
Total Steps: 8
Image 1
Phosphorylation:
Definition: Formation of ATP from ADP + inorganic phosphate by using energy
Energy: 7.6 kcal
Types of Phosphorylation:

Table 1: Phosphorylation types

Type
Meaning
Substrate-level phosphorylation
Direct ATP production at respiration site; no carrier needed
Chemiosmotic ATP formation
ATP produced by \(H^+\) gradient; passive process
Oxidative phosphorylation
ATP formation with carriers
Carriers:
  • Coenzymes → \(NADH_2\), \(FADH_2\)
  • Cytochromes
Cytochrome Sequence: \(b \rightarrow c_1 \rightarrow c \rightarrow a \rightarrow a_3\)
Cytochrome Ion: Fe
Cyanide: Kills organism by inhibiting cytochrome oxidase
Shuttle System:

Table 1: Shuttle systems

Shuttle
Electron transfer
ATP yield
Malate-aspartate shuttle
Cytoplasmic \(NADH_2\) → mitochondrial NAD
38 ATP; more efficient
Glycerol-phosphate shuttle
Cytoplasmic \(NADH_2\) → mitochondrial FAD
36 ATP
Image 1
Image 1
📚
ENERGY CALCULATION
Total ATP:

Table 1: ATP yield

Respiration / Cell type
ATP
Anaerobic respiration
2
Aerobic respiration
38
Aerobic respiration in prokaryotes
38
Examples of prokaryotes
Mycoplasma, bacteria
Aerobic respiration in eukaryotes
36
Muscles + neurons
36
Heart / myocardial tissue, lungs, kidney
38
Stepwise ATP Calculation:

Table 1: ATP calculation from 1 glucose

Step
Substrate ATP
Through \(NADH_2\)
Through \(FADH_2\)
Total ATP
Glycolysis
2
\(2 \times 3 = 6\) / \(2 \times 2 = 4\)
0
8 / 6
Oxidative decarboxylation
0
\(2 \times 3 = 6\)
0
6
Krebs cycle
2 through GTP
\(6 \times 3 = 18\)
\(2 \times 2 = 4\)
24
ETS
0
\(10 \times 3 = 30\)
\(2 \times 2 = 4\)
36 in eukaryotes / 38 in prokaryotes, heart, lungs, kidney
Special Points:
  • Aerobic glycolysis → 8 ATP
  • Anaerobic glycolysis → 2 ATP
  • 1 glucose → 2 pyruvic acid
  • Each pyruvic acid after complete aerobic metabolism → 15 ATP
  • Each acetyl-CoA after aerobic metabolism → 12 ATP
  • 1 glucose → 1 glycolysis + 2 Krebs cycles
  • 2 Krebs cycles per glucose → 24 ATP
  • Out of 4 ETS structural complexes, ATP produced at 3 complexes only
📚
ANAEROBIC RESPIRATION
Basic Flow: \(Glucose \rightarrow Pyruvic\ acid \rightarrow End\ products\)
ATP Yield: 2 ATP
Pathways:

Table 1: Anaerobic pathways

Organism / Condition
Enzyme / Agent
End product
Yeast
Zymase
Ethyl alcohol + \(CO_2\)
Lactobacillus + muscles
Lactic acid fermentation
Lactic acid
Acetobacter
Acetaldehyde oxidation
Acetic acid
Clostridium butyricum
Butyric fermentation
Butyric acid
Alcoholic Fermentation: \(Pyruvic\ acid \xrightarrow{Yeast/Zymase} Ethyl\ alcohol + CO_2\)
Lactic Acid Fermentation: \(Pyruvic\ acid \xrightarrow{Lactobacillus/muscles} Lactic\ acid\)
MCQ Point:
📚
RESPIRATORY QUOTIENT
Definition: Ratio of volume of \(CO_2\) evolved to volume of \(O_2\) consumed in respiration
Formula: \(RQ = \frac{Volume\ of\ CO_2\ evolved}{Volume\ of\ O_2\ consumed}\)
Measurement: Ganong’s respirometer
Depends On: Respiratory substrate
RQ Values:

Table 1: Respiratory quotient values

Substrate / Condition
RQ
Example / Note
Carbohydrates
1
Floating respiration
Lipids / fats
<1; about 0.7
Protoplasmic respiration
Proteins
<1; about 0.8–0.9
Protoplasmic respiration
Organic acids
>1
Malic acid, oxalic acid
Succulent plants
0
Bryophyllum, Opuntia, Agave, Aloe
Anaerobic respiration
\(\infty\)
Oxygen not used; e.g., yeast
Q1.
During anaerobic respiration, Yeast converts glucose into:  [IOM 2004, 2001]
📅IOM 2004, 2001
Q2.
Glycolysis takes place in:
Q3.
Respiration and Photosynthesis both require:  [IOM 2002]
📅IOM 2002
Q4.
For anaerobic respiration, respiratory quotient is:  [IOM 1996]
📅IOM 1996
Q5.
Fermentation is an………process:  [IOM 1996]
📅IOM 1996
Q6.
The common phase between aerobic and anaerobic reaction is:  [BPKIHS 2004]
📅BPKIHS 2004
Q7.
The following is an example of competitive inhibition of enzyme:  [BPKIHS 2005]
📅BPKIHS 2005
Q8.
In aerobic respiration, respiratory quotient or respiratory ratio of 1 occurs with: [BPKIHS 2006]
📅BPKIHS 2006
Q9.
All of the following are features of glycolysis EXCEPT:  [BPKIHS 2006]
📅BPKIHS 2006
Q10.
Kreb's cycle begins with:  [BPKIHS 2006]
📅BPKIHS 2006
Q11.
The end products of fermentation are:  [BPKIHS 2006]
📅BPKIHS 2006
Q12.
When the fats are the respiratory substrate the Respiratory Quotient (R.Q.) will be: [BPKIHS 2007]
📅BPKIHS 2007
Q13.
The end product of Kreb's cycle is:  [BPKIHS 2007]
📅BPKIHS 2007
Q14.
Cyanide kill an organism by inhibiting: [BPKIHS 2007]
📅BPKIHS 2007
Q15.
The link between glycolysis and Kreb's cycle is: [MOE 2062]
📅MOE 2062
Q16.
Number of ATP from complete oxidation of 1 molecule of pyruvic acid is: [MOE 2062]
📅MOE 2062
Q17.
Which of the following leads to wastage of energy?  [MOE 2060]
📅MOE 2060
Q18.
Pyruvic acid is
Q19.
The process in which CO_2 is released is:  [MOE 2060]
📅MOE 2060
Q20.
The process in which protoplasm is constructed and destructed: [MOE-2003]
📅MOE-2003
Q21.
The end product of glycolysis is pyruvic acid having:  [MOE 2058]
📅MOE 2058
Q22.
ATP is not released in:  [MOE 2056, 2055]
📅MOE 2056, 2055
Q23.
Aerobic respiration inside the cell occurs in: [MOE 2052]
📅MOE 2052
Q24.
Respiratory opening of the plant is:  [MOE 2052]
📅MOE 2052
Q25.
ADP differs from ATP in having
Q26.
The plant which performs Crassulacean Acid Metabolism is
Q27.
The production of ATP by oxidative phosphorylation is driven by energy from: [IE 2006]
📅IE 2006
Q28.
Photorespiration occurs in:  [IOM 2014]
📅IOM 2014
Q29.
The electron transfer system is present in  [IOM 2014]
📅IOM 2014
Q30.
In prokaryotes the total number of ATP produced in aerobic respiration is  [IOM 2014]
📅IOM 2014
Q31.
Alcohol fermentation takes place in the presence of:  [IOM 2013]
📅IOM 2013
Q32.
Pyruvic acid is changed into CO_2  and H_2 O in  [IOM 2013]
📅IOM 2013
Q33.
Glycolysis occurs in
Q34.
Kreb's cycle occurs in  [MOE 2013]
📅MOE 2013
Q35.
Respiration is performed by all the living cells of the plant  [MOE 2068]
📅MOE 2068
Q36.
Glycolysis takes place in [MOE 2068]
📅MOE 2068
Q37.
Kreb's cycle is involved in  [MOE 2010]
📅MOE 2010
Q38.
Oxidation of glucose takes place in [MOE 2010]
📅MOE 2010
Q39.
In cyclic phosphorylation, main product is  [MOE 2010]
📅MOE 2010